Watching the Copper Site of SOD1
SOD1 is assembled from two matching subunits of roughly 150 amino acids apiece. Each subunit holds one copper ion and one zinc ion, sitting just a few tenths of a nanometer apart. The chemistry itself happens at the copper.
Flipping Between Two Charge States
The copper ion can be present as Cu2+ or as Cu+. When a superoxide molecule meets the oxidized form, it gives up its surplus electron to the copper and exits the enzyme as ordinary oxygen. The copper, now reduced, passes that electron along to the next superoxide molecule, which combines with two protons to become hydrogen peroxide.
2 O2•− + 2 H+ → O2 + H2O2
At that point the copper is back to Cu2+, and the loop can start again. The enzyme is not consumed along the way. This exact sequence is the biochemical backdrop to the following claim:
Copper contributes to the protection of cells from oxidative stress
EU-authorized wording · Regulation (EU) No 432/2012
What the Zinc Ion Next Door Is Doing
The zinc ion never takes on electrons itself. It is linked to the copper through a shared histidine residue and keeps the protein loop that shapes the active site in its proper position. Without that structural anchor, the pocket around the copper would hold its shape less firmly.
Chemistry Running Close to the Physical Speed Limit
The measured rate constant of SOD1 is on the order of 109 per mole per second. That is roughly as fast as molecules in a watery solution can bump into each other at all. The trick lies in positively charged amino acids at the mouth of the pocket, which steer the negatively charged superoxide straight toward the copper.